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Despite the clinical relevance of major tuberculous pathogens to domestic animals and humans, the understanding of mycobacterial transmission modes, pathways, and interactions in their natural habitats remains very limited. The reason for this is primarily because ecological and evolutionary concepts have not yet been widely applied to the understanding of these bacteria. Most existing research on mycobacterial transmission is not founded on hypothesis testing but rather tends to accept the most recent explanation and turn it into a canonical fact. In this comparative review, we discuss plausible alternative hypotheses against a null hypothesis of environmental origin to intensify research on mycobacterial pathogens and their capacity to spread in the context of global change. We highlight a major bias in perceptions of mycobacterial infection transmission, with most work concentrating only on the contagious stage of tuberculous clones. We suggest broadening the field to include research on environmental non-tuberculous mycobacteria and their life histories. A deeper understanding of mycobacterial ecology and evolution is more important now than ever, considering the vast diversity of known and unknown mycobacterial species in natural ecosystems. Infectious disease medicine, veterinary science, and public health surveillance should take a more integrative disease ecology approach to enhance the development of new approaches for control of these animal and human pathogens. 

Abstract BackgroundSeasonal patterns of mycobacterial infections affecting humans and animals remain a complex and understudied aspect of infectious disease dynamics. These intra-annual patterns are increasingly relevant in the context of global climate change, which may influence the timing and geographic spread of these diseases. A better understanding of such patterns could improve surveillance, prevention, and control strategies. MethodsWe conducted a mixed-methods bibliometric review combining bibliographic searches and scoping analysis to synthesize decades of research on the seasonality of mycobacterial infections in humans and animals. We systematically searched three major scientific databases—Scopus, PubMed-MEDLINE, and Web of Science—for articles published between 1971 and April 2023. From an initial dataset of 1830 unique articles, we identified and analysed 122 studies that met predefined inclusion criteria. We extracted information on pathogen type, statistical methods, geographic location, and host species. In addition, we conducted a co-citation network analysis to identify key methodological influences and research clusters. ResultsThe retained studies encompassed tuberculosis, Buruli ulcer, bovine tuberculosis, and other mycobacterial diseases such as leprosy and Johne’s disease. Most articles focused on tuberculosis in humans, followed by Buruli ulcer caused byMycobacterium ulcerans. There was a marked increase in studies on seasonal trends in tuberculosis and Buruli ulcer over time, with notable variation in geographic and methodological coverage. Research was heavily concentrated in the northern hemisphere, especially in China, while southern regions remained underrepresented. Advanced statistical tools, including generalized linear models and time-series analyses, were instrumental in detecting seasonality, particularly for tuberculosis and Buruli ulcer. ConclusionSeasonality appears to be a common yet understudied feature of many mycobacterial infections. Greater interdisciplinary collaboration and the use of appropriate analytical tools are essential to better understand these patterns, especially in underrepresented regions. Addressing methodological and geographic gaps will be crucial to improve responses to these diseases in a changing global environment. 

Despite recent interest in land-use and land-cover (LULC) change effects on emerging infectious diseases (EIDs), the debate on global potential health threats remains polarizing. These depend on diverse LULC changes, different types of infectious disease systems, and spatio-temporal scales of studies. Here, using both a bibliometric and scoping review method, we summarize the reliability and availability of published relevant studies on LULC effects on mycobacteria, an important group of infectious bacteria that affect humans and both wild and domestic animals. We make connections of LULC with environmental changes (e.g. soils) that likely lead to an increased risk of mycobacteria spillover to human and other animal populations. An important feature of our review is a focus on research from the richest countries of the world, though some studies have been done in Africa, Asia and South America. Geographically, regions experiencing important LULC transformations, such as many tropical regions of Meso- and South America and Southeast Asia, have been given little or no attention in this important topic. Research onMycobacterium bovis,and to a larger extent onM. ulcerans,constitutes convincing illustrations of the importance of acknowledging shifts in spatio-temporal scales, from local to global and inter-annual to decadal ones, when evaluating responses of mycobacteria to LULC changes. However, studies on other pathogenic mycobacteria remain very much confined to local and dispersed scales. To date, the role of LULC change effects has not been adequately studied for many human and animal pathogens, and more research and attention to this issue is clearly needed. This review provides a comprehensive set of data on the updates of LULC change and their impact on animal and human mycobacterial infections. It also proposes several research recommendations, in particular to better understand the emergence of mycobacteria in context, by multiplying study sites in different regions of the world and in adopting an ecosystem-based perspective, in order to encourage interdisciplinary research better linking environmental microbiology, veterinary science and medical research. 

Pathogens such as bacteria, fungi and viruses are important components of soil and aquatic communities, where they can benefit from decaying and living organic matter, and may opportunistically infect human and animal hosts. One-third of human infectious diseases is constituted by sapronotic disease agents that are natural inhabitants of soil or aquatic ecosystems. They are capable of existing and reproducing in the environment outside of the host for extended periods of time. However, as ecological research on sapronosis is infrequent and epidemiological models are even rarer, very little information is currently available. Their importance is overlooked in medical and veterinary research, as well as the relationships between free environmental forms and those that are pathogenic. Here, using dynamical models in realistic aquatic metacommunity systems, we analyze sapronosis transmission, using the human pathogenMycobacterium ulceransthat is responsible for Buruli ulcer. We show that the persistence of bacilli in aquatic ecosystems is driven by a seasonal upstream supply, and that the attachment and development of cells to aquatic living forms is essential for such pathogen persistence and population dynamics. Our work constitutes the first set of metacommunity models of sapronotic disease transmission, and is highly flexible for adaptation to other types of sapronosis. The importance of sapronotic agents on animal and human disease burden needs better understanding and new models of sapronosis disease ecology to guide the management and prevention of this important group of pathogens. 

ABSTRACT Mycobacterium ulceranspseudoshottsiiis a mycolactone‐producing bacterium previously isolated from Striped Bass (Morone saxatilis(Walbaum)) from Chesapeake Bay and adjacent waters of the Atlantic Coast of North America. We report the first molecular detection of this pathogen in the native Gulf strain ofMorone saxatiliscollected from the Pearl River, Mississippi (USA). Molecular identification was conducted using a novel PCR assay targeting the parA‐625 intergenic spacer of the virulence‐associated pMUM plasmid. The isolate was unambiguously assigned toM. u. pseudoshottsiibased on diagnostic single nucleotide polymorphisms (SNPs) and phylogenetic analysis. This report expands the known range ofM. u. pseudoshottsiito include Gulf Coast watersheds and highlights the need for enhanced surveillance in wild and aquacultured fish populations of the southern United States.